Important Notice to NIG SuperComputer users
| Date | Title |
|---|---|
| Thursday, 28 March 2013 11:39 | Announcement of a new website for the National Institute of Genetics Supercomputer System |
This site provides various pieces of information on the computer resources and applications provided by the NIG Supercomputer System as well as the procedures for using them. To access the various services provided by the DDBJ Center, please visit their website
Disk usage
UGEqueue Usage summary
It is a usage summary of UGE the current queue. The data is updated every 10 minutes.
The table below represents slots in each compute node, the memory usage.
Upon job submission, please refer to a mixed situation.
Subject to availability, a new job, there is a possibility that wait time occurs.
Phase 1
Research for fat/meduam compute nodes
| qname | host | slot | memory (GB) | ||||
|---|---|---|---|---|---|---|---|
| use / all prcent | disabled | in use | req / all percent | ||||
Research for thin compute nodes
※month_gpu.q and short.q belongs to same node. therefore, their "in use memory" is also the same value..| qname | host | slot | memory (GB) | ||||
|---|---|---|---|---|---|---|---|
| use / all percent | disabled | in use | req / all percent | ||||
Phase 2
Research for meduam compute nodes
| qname | host | slot | memory (GB) | ||||
|---|---|---|---|---|---|---|---|
| use / all prcent | disabled | in use | req / all percent | ||||
Research for thin compute nodes
※month_gpu.q and short.q belongs to same node. therefore, their "in use memory" is also the same value.| qname | host | slot | memory (GB) | ||||
|---|---|---|---|---|---|---|---|
| use / all percent | disabled | in use | req / all percent | ||||
Businessh for thin compute nodes
| qname | host | slot | memory (GB) | ||||
|---|---|---|---|---|---|---|---|
| use / all percent | disabled | in use | req / all percent | ||||
| slot |
use | the number of job slots in use |
| all | the total number of job slots the queue held | |
| percent | a slot utilization in use job | |
| disabled | the number of job slots in disabled | |
| memory (unit：GB) |
in use | The total amount of memory currently in use |
| req | The total amount of memory that is reserved by the job currently running | |
| all | The total amount of memory that the host held | |
| percent | It is the memory allocation rate of currently running job | |
| percent (slot usage rate memory allocation rate) |
0%～50% |  |
| 51%～79% |  |
|
| 80%～100% |  |
Announcement
Bibliography
Nucleic Acids Res. 2013 Jan;41(Database issue):D25-9. doi: 10.1093/nar/gks1152. Epub 2012 Nov 24.
DDBJ new system and service refactoring.
Ogasawara O, Mashima J, Kodama Y, Kaminuma E, Nakamura Y, Okubo K, Takagi T.
